Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formylglycine-generating enzyme family protein | DU508_12985 | Not Available | Negative | 3014295 - 3014975 | 26123.1 |
| dna polymerase iii subunit delta | DU508_12990 | Not Available | Positive | 3015072 - 3016094 | 38630.8 |
| hypothetical protein | DU508_12995 | Not Available | Negative | 3016110 - 3016490 | 14113.5 |
| voc family protein | DU508_13000 | Not Available | Positive | 3016635 - 3016997 | 13702.0 |
| hypothetical protein | DU508_13005 | Not Available | Negative | 3017002 - 3017322 | 11901.5 |
| crp/fnr family transcriptional regulator | DU508_13010 | Not Available | Positive | 3017685 - 3018275 | 22899.5 |
| flavodoxin family protein | DU508_13015 | Not Available | Positive | 3018352 - 3018939 | 22321.4 |
| alpha/beta fold hydrolase | DU508_13020 | Not Available | Positive | 3019007 - 3019825 | 29252.6 |
| nad-dependent epimerase/dehydratase family protein | DU508_13025 | Not Available | Positive | 3019954 - 3020592 | 23247.5 |
| hypothetical protein | DU508_13030 | Not Available | Positive | 3021209 - 3021433 | 8604.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

