Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cadmium-translocating p-type atpase | DU508_12935 | Not Available | Positive | 3001378 - 3003192 | 65937.4 |
| uma2 family endonuclease | DU508_12940 | Not Available | Positive | 3003352 - 3003987 | 24069.9 |
| uma2 family endonuclease | DU508_12945 | Not Available | Positive | 3003995 - 3004627 | 24243.0 |
| uma2 family endonuclease | DU508_12950 | Not Available | Positive | 3004635 - 3005267 | 24088.0 |
| valine--trna ligase | DU508_12955 | Not Available | Positive | 3005714 - 3008425 | 104285.0 |
| hypothetical protein | DU508_12960 | Not Available | Negative | 3008541 - 3008780 | 9336.34 |
| gfo/idh/moca family oxidoreductase | DU508_12965 | Not Available | Positive | 3008924 - 3010279 | 50712.0 |
| duf1080 domain-containing protein | DU508_12970 | Not Available | Positive | 3010673 - 3012037 | 50458.1 |
| gfo/idh/moca family oxidoreductase | DU508_12975 | Not Available | Positive | 3012037 - 3013230 | 44431.6 |
| restriction endonuclease subunit r | DU508_12980 | Not Available | Negative | 3013813 - 3014271 | 17816.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

