Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_12885 | Not Available | Positive | 2991870 - 2992241 | 14264.0 |
| hypothetical protein | DU508_12890 | Not Available | Negative | 2992238 - 2992639 | 14993.9 |
| nucleoside triphosphate pyrophosphohydrolase | DU508_12895 | Not Available | Negative | 2992643 - 2993449 | 30915.6 |
| hypothetical protein | DU508_12900 | Not Available | Negative | 2993545 - 2993994 | 17164.8 |
| ai-2e family transporter | DU508_12905 | Not Available | Negative | 2994014 - 2995123 | 41501.9 |
| aldo/keto reductase | DU508_12910 | Not Available | Negative | 2995202 - 2996149 | 35731.0 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | DU508_12915 | Not Available | Negative | 2996315 - 2996983 | 24828.5 |
| hypothetical protein | DU508_12920 | Not Available | Positive | 2997287 - 2997625 | 12762.5 |
| duf2625 domain-containing protein | DU508_12925 | Not Available | Negative | 2997681 - 2998457 | 28975.0 |
| m13 family peptidase | DU508_12930 | Not Available | Negative | 2998678 - 3000714 | 76110.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

