Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | DU508_12835 | Not Available | Negative | 2982147 - 2983262 | 42539.7 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | DU508_12840 | Not Available | Negative | 2983337 - 2984158 | 29691.2 |
| rna-binding s4 domain-containing protein | DU508_12845 | Not Available | Positive | 2984462 - 2984863 | 15123.1 |
| ecsc family protein | DU508_12850 | Not Available | Negative | 2984934 - 2985707 | 29533.2 |
| nucleoside deaminase | DU508_12855 | Not Available | Negative | 2985761 - 2986243 | 17997.5 |
| omph family outer membrane protein | DU508_12860 | Not Available | Negative | 2986313 - 2986912 | 22385.3 |
| hypothetical protein | DU508_12865 | Not Available | Positive | 2987874 - 2988146 | 10528.0 |
| dna topoisomerase (atp-hydrolyzing) subunit b | DU508_12870 | Not Available | Positive | 2988435 - 2990393 | 72272.1 |
| hypothetical protein | DU508_12875 | Not Available | Negative | 2990491 - 2990934 | 16537.6 |
| trna pseudouridine synthase a | DU508_12880 | Not Available | Negative | 2990985 - 2991785 | 30915.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

