Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta | DU508_12785 | Not Available | Positive | 2966273 - 2970076 | 142278.0 |
| dna-directed rna polymerase subunit beta' | DU508_12790 | Not Available | Positive | 2970167 - 2974453 | 159467.0 |
| duf3467 domain-containing protein | DU508_12795 | Not Available | Positive | 2974592 - 2974903 | 11546.8 |
| long-chain fatty acid transporter | DU508_12800 | Not Available | Positive | 2974992 - 2976215 | 44118.3 |
| g-d-s-l family lipolytic protein | DU508_12805 | Not Available | Positive | 2976227 - 2977504 | 44786.2 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DU508_12810 | Not Available | Negative | 2977562 - 2978470 | 34366.1 |
| hypothetical protein | DU508_12815 | Not Available | Negative | 2978550 - 2979194 | 24831.1 |
| hd domain-containing protein | DU508_12820 | Not Available | Negative | 2979294 - 2980700 | 53695.8 |
| threonylcarbamoyl-amp synthase | DU508_12825 | Not Available | Negative | 2980804 - 2981370 | 21018.3 |
| duf4136 domain-containing protein | DU508_12830 | Not Available | Positive | 2981571 - 2982146 | 21436.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

