Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s21 | DU508_12685 | Not Available | Positive | 2956758 - 2956952 | 7555.24 |
| integrase | DU508_12690 | Not Available | Positive | 2957113 - 2957997 | 33898.1 |
| ribosome-associated translation inhibitor raia | DU508_12695 | Not Available | Positive | 2958012 - 2958359 | 13045.6 |
| Trna-thr | Not Available | Not Available | Positive | 2958590 - 2958662 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 2958701 - 2958786 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2958874 - 2958949 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 2959025 - 2959096 | Not Available |
| elongation factor tu | DU508_12720 | Not Available | Positive | 2959215 - 2960402 | 42927.8 |
| Trna-trp | Not Available | Not Available | Positive | 2960457 - 2960530 | Not Available |
| preprotein translocase subunit sece | DU508_12730 | Not Available | Positive | 2960624 - 2960821 | 7332.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

