Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | DU508_12625 | Not Available | Negative | 2944844 - 2945752 | 34691.6 |
| lysr family transcriptional regulator | DU508_12630 | Not Available | Positive | 2945904 - 2946761 | 31941.8 |
| crp/fnr family transcriptional regulator | DU508_12635 | Not Available | Positive | 2946780 - 2947343 | 21836.4 |
| rida family protein | DU508_12640 | Not Available | Positive | 2947566 - 2947955 | 14717.4 |
| nadph:quinone oxidoreductase | DU508_12655 | Not Available | Positive | 2949267 - 2950235 | 35352.6 |
| nuclear transport factor 2 family protein | DU508_12660 | Not Available | Positive | 2950258 - 2950587 | 12225.3 |
| gnat family n-acetyltransferase | DU508_12665 | Not Available | Negative | 2950709 - 2952460 | 66439.3 |
| hypothetical protein | DU508_12670 | Not Available | Positive | 2952555 - 2953454 | 34668.7 |
| acyl-coa dehydrogenase | DU508_12675 | Not Available | Positive | 2954540 - 2955691 | 41648.9 |
| hypothetical protein | DU508_12680 | Not Available | Negative | 2956205 - 2956588 | 14521.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

