Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | DU508_01175 | Not Available | Positive | 279211 - 280401 | 43803.6 |
| hypothetical protein | DU508_01180 | Not Available | Negative | 280592 - 281281 | 26915.8 |
| radical sam protein | DU508_01185 | Not Available | Positive | 281548 - 283764 | 84106.8 |
| hypothetical protein | DU508_01190 | Not Available | Negative | 285538 - 285801 | 9926.04 |
| amidohydrolase | DU508_01195 | Not Available | Negative | 285832 - 288924 | 113911.0 |
| recq family atp-dependent dna helicase | DU508_01200 | Not Available | Positive | 289131 - 291023 | 72044.1 |
| mfs transporter | DU508_01205 | Not Available | Positive | 291565 - 292872 | 48737.5 |
| (fe-s)-binding protein | DU508_01210 | Not Available | Positive | 292894 - 293631 | 27475.7 |
| hypothetical protein | DU508_01215 | Not Available | Positive | 293850 - 294797 | 34625.6 |
| threonine--trna ligase | DU508_01220 | Not Available | Positive | 295179 - 297104 | 73117.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

