Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pirin family protein | DU508_12525 | Not Available | Negative | 2929276 - 2930190 | 33880.9 |
| sodium:proton antiporter | DU508_12530 | Not Available | Negative | 2930260 - 2932563 | 85809.5 |
| osmc family peroxiredoxin | DU508_12535 | Not Available | Negative | 2932644 - 2933096 | 17034.0 |
| n-acetyltransferase | DU508_12540 | Not Available | Negative | 2933075 - 2933377 | 11582.0 |
| (4fe-4s)-binding protein | DU508_12545 | Not Available | Negative | 2933390 - 2933602 | 7903.72 |
| branched-chain amino acid abc transporter substrate-binding protein | DU508_12550 | Not Available | Negative | 2933658 - 2934860 | 43776.7 |
| hypothetical protein | DU508_12555 | Not Available | Negative | 2934894 - 2935214 | 12021.2 |
| hypothetical protein | DU508_12560 | Not Available | Negative | 2935278 - 2936777 | 57621.2 |
| nuclear transport factor 2 family protein | DU508_12565 | Not Available | Negative | 2936841 - 2937242 | 15082.7 |
| alpha/beta hydrolase | DU508_12570 | Not Available | Negative | 2937344 - 2938246 | 33281.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

