Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mred | DU508_12425 | Not Available | Negative | 2905477 - 2905992 | 19758.9 |
| rod shape-determining protein mrec | DU508_12430 | Not Available | Negative | 2905985 - 2906824 | 30985.6 |
| rod shape-determining protein | DU508_12435 | Not Available | Negative | 2906915 - 2907937 | 36735.0 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase purh | DU508_12440 | Not Available | Negative | 2908275 - 2909801 | 55351.2 |
| phosphoribosylglycinamide formyltransferase | DU508_12445 | Not Available | Negative | 2910839 - 2911417 | 22089.6 |
| 30s ribosomal protein s20 | DU508_12450 | Not Available | Positive | 2911659 - 2911913 | 9602.93 |
| dna repair protein radc | DU508_12455 | Not Available | Positive | 2911987 - 2912685 | 25987.1 |
| endonuclease | DU508_12460 | Not Available | Positive | 2912816 - 2913652 | 31686.9 |
| phenylalanine--trna ligase subunit beta | DU508_12465 | Not Available | Positive | 2914365 - 2916764 | 88120.4 |
| hypothetical protein | DU508_12470 | Not Available | Positive | 2916796 - 2917086 | 10765.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

