Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional aldolase/short-chain dehydrogenase | DU508_12325 | Not Available | Positive | 2876659 - 2878779 | 76783.8 |
| sugar isomerase | DU508_12330 | Not Available | Positive | 2879051 - 2880334 | 47221.1 |
| carbohydrate kinase | DU508_12335 | Not Available | Positive | 2880352 - 2881731 | 52205.4 |
| gntr family transcriptional regulator | DU508_12340 | Not Available | Positive | 2882027 - 2883058 | 39258.6 |
| mfs transporter | DU508_12345 | Not Available | Positive | 2883807 - 2885096 | 47171.3 |
| hydroxyacid dehydrogenase | DU508_12350 | Not Available | Positive | 2885120 - 2886097 | 36598.6 |
| sugar kinase | DU508_12355 | Not Available | Positive | 2886103 - 2887557 | 54510.7 |
| carbohydrate kinase | DU508_12360 | Not Available | Positive | 2887557 - 2889008 | 53339.5 |
| histidine phosphatase family protein | DU508_12365 | Not Available | Positive | 2889001 - 2889600 | 22584.9 |
| glycerophosphodiester phosphodiesterase | DU508_12370 | Not Available | Positive | 2889608 - 2890555 | 35517.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

