Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l9 | DU508_12120 | Not Available | Positive | 2827025 - 2827468 | 16073.5 |
| short chain dehydrogenase | DU508_12125 | Not Available | Negative | 2827531 - 2828235 | 25041.1 |
| hypothetical protein | DU508_12130 | Not Available | Negative | 2828298 - 2828999 | 26859.9 |
| monofunctional biosynthetic peptidoglycan transglycosylase | DU508_12135 | Not Available | Positive | 2829067 - 2829789 | 27645.1 |
| carbonic anhydrase | DU508_12140 | Not Available | Positive | 2830051 - 2830824 | 28158.1 |
| asma family protein | DU508_12145 | Not Available | Negative | 2831017 - 2833440 | 89300.2 |
| abc transporter atpase | DU508_12150 | Not Available | Negative | 2833962 - 2834441 | 18589.0 |
| hypothetical protein | DU508_12155 | Not Available | Positive | 2834492 - 2834968 | 18364.9 |
| (fe-s)-binding protein | DU508_12160 | Not Available | Negative | 2835045 - 2835833 | 28943.1 |
| 4fe-4s dicluster domain-containing protein | DU508_12165 | Not Available | Negative | 2835918 - 2837213 | 48496.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

