Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-binding protein | DU508_12070 | Not Available | Positive | 2815426 - 2815770 | 12548.0 |
| tonb-dependent receptor | DU508_12075 | Not Available | Negative | 2815828 - 2817879 | 77095.4 |
| sorbosone dehydrogenase family protein | DU508_12080 | Not Available | Negative | 2817954 - 2819273 | 47297.7 |
| nadp-dependent isocitrate dehydrogenase | DU508_12085 | Not Available | Positive | 2819561 - 2821780 | 79786.8 |
| hypothetical protein | DU508_12090 | Not Available | Positive | 2822100 - 2822507 | 15325.8 |
| dna polymerase iii subunit gamma/tau | DU508_12095 | Not Available | Negative | 2822588 - 2824423 | 68860.2 |
| arac family transcriptional regulator | DU508_12100 | Not Available | Negative | 2824530 - 2825402 | 33241.9 |
| hypothetical protein | DU508_12105 | Not Available | Positive | 2825579 - 2826172 | 22309.6 |
| 30s ribosomal protein s6 | DU508_12110 | Not Available | Positive | 2826392 - 2826748 | 13447.2 |
| 30s ribosomal protein s18 | DU508_12115 | Not Available | Positive | 2826748 - 2827011 | 10240.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

