Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_01125 | Not Available | Positive | 271262 - 271468 | 7536.95 |
| gnat family n-acetyltransferase | DU508_01130 | Not Available | Negative | 271613 - 273121 | 57427.8 |
| holliday junction branch migration dna helicase ruvb | DU508_01135 | Not Available | Negative | 273413 - 274435 | 37449.0 |
| 3-hydroxybutyryl-coa dehydrogenase | DU508_01140 | Not Available | Negative | 274467 - 275360 | 32432.5 |
| pyridoxamine 5'-phosphate oxidase | DU508_01145 | Not Available | Negative | 275433 - 276083 | 25116.9 |
| yqge/algh family protein | DU508_01150 | Not Available | Positive | 276131 - 276694 | 21314.2 |
| duf86 domain-containing protein | DU508_01155 | Not Available | Negative | 276746 - 277087 | 13508.3 |
| nucleotidyltransferase | DU508_01160 | Not Available | Negative | 277068 - 277382 | 11982.5 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | DU508_01165 | Not Available | Negative | 277404 - 277928 | 18187.1 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | DU508_01170 | Not Available | Negative | 278018 - 279157 | 42490.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

