Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osmc family peroxiredoxin | DU508_11965 | Not Available | Negative | 2799695 - 2800168 | 17229.5 |
| amino acid-binding act domain-containing protein | DU508_11970 | Not Available | Negative | 2800187 - 2800582 | 14739.8 |
| transcriptional regulator | DU508_11975 | Not Available | Positive | 2800651 - 2801340 | 26166.7 |
| duf3817 domain-containing protein | DU508_11980 | Not Available | Negative | 2801494 - 2801811 | 12116.1 |
| hypothetical protein | DU508_11985 | Not Available | Negative | 2801814 - 2802278 | 17858.2 |
| hypothetical protein | DU508_11990 | Not Available | Negative | 2802281 - 2802718 | 16162.1 |
| tetr/acrr family transcriptional regulator | DU508_11995 | Not Available | Negative | 2802793 - 2803383 | 22610.4 |
| doxx family protein | DU508_12000 | Not Available | Negative | 2803551 - 2803904 | 13090.4 |
| sdr family nad(p)-dependent oxidoreductase | DU508_12005 | Not Available | Negative | 2804187 - 2805182 | 35693.4 |
| fad-dependent monooxygenase | DU508_12010 | Not Available | Negative | 2805316 - 2806569 | 47319.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

