Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4256 domain-containing protein | DU508_11915 | Not Available | Negative | 2789482 - 2790048 | 21722.6 |
| arac family transcriptional regulator | DU508_11920 | Not Available | Negative | 2790175 - 2790984 | 31520.1 |
| hypothetical | DU508_11925 | Not Available | Negative | 2791130 - 2792202 | 39339.8 |
| isocitrate lyase/phosphoenolpyruvate mutase family protein | DU508_11930 | Not Available | Negative | 2792193 - 2792966 | 29489.8 |
| arac family transcriptional regulator | DU508_11935 | Not Available | Negative | 2793286 - 2794203 | 35430.5 |
| nad(p)-dependent alcohol dehydrogenase | DU508_11940 | Not Available | Negative | 2794260 - 2795300 | 37871.3 |
| ankyrin repeat domain-containing protein | DU508_11945 | Not Available | Negative | 2795574 - 2796317 | 28046.7 |
| class i sam-dependent methyltransferase | DU508_11950 | Not Available | Negative | 2796591 - 2797343 | 28642.7 |
| fic family protein | DU508_11955 | Not Available | Negative | 2797334 - 2798440 | 42242.9 |
| hypothetical protein | DU508_11960 | Not Available | Negative | 2798838 - 2799395 | 21500.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

