Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_11865 | Not Available | Positive | 2782288 - 2782542 | 9990.0 |
| hypothetical protein | DU508_11870 | Not Available | Positive | 2782667 - 2783224 | 21472.2 |
| dinb family protein | DU508_11875 | Not Available | Negative | 2783422 - 2783949 | 20532.5 |
| duf4199 domain-containing protein | DU508_11880 | Not Available | Negative | 2784846 - 2785388 | 20261.5 |
| dna-binding response regulator | DU508_11885 | Not Available | Negative | 2785629 - 2786021 | 14908.6 |
| hypothetical protein | DU508_11890 | Not Available | Positive | 2786308 - 2787099 | 29303.0 |
| alpha-ketoglutarate-dependent dioxygenase alkb | DU508_11895 | Not Available | Negative | 2787127 - 2787735 | 23348.9 |
| metal-binding protein | DU508_11900 | Not Available | Negative | 2787711 - 2787959 | 9475.51 |
| methylated-dna--[protein]-cysteine s-methyltransferase | DU508_11905 | Not Available | Negative | 2788004 - 2788861 | 31664.0 |
| hypothetical protein | DU508_11910 | Not Available | Negative | 2788942 - 2789319 | 14041.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

