Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| res domain-containing protein | DU508_11715 | Not Available | Positive | 2746757 - 2747209 | 17292.8 |
| acyl transferase | DU508_11720 | Not Available | Negative | 2747211 - 2748194 | 37221.4 |
| hypothetical protein | DU508_11725 | Not Available | Negative | 2748214 - 2748573 | 13284.0 |
| penicillin acylase family protein | DU508_11730 | Not Available | Negative | 2748580 - 2751009 | 92043.0 |
| tonb-dependent receptor | DU508_11735 | Not Available | Positive | 2751205 - 2754132 | 106144.0 |
| duf4968 domain-containing protein | DU508_11740 | Not Available | Positive | 2754292 - 2756754 | 96248.6 |
| 1,4-alpha-glucan branching protein glgb | DU508_11745 | Not Available | Positive | 2756810 - 2758777 | 75715.7 |
| tonb-dependent receptor | DU508_11750 | Not Available | Negative | 2759122 - 2761311 | 82584.9 |
| hypothetical protein | DU508_11755 | Not Available | Positive | 2761408 - 2761674 | 10094.4 |
| hypothetical protein | DU508_11760 | Not Available | Positive | 2762210 - 2762527 | 12235.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

