Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide biosynthesis protein | DU508_11310 | Not Available | Negative | 2649820 - 2651970 | 81446.7 |
| hypothetical protein | DU508_11315 | Not Available | Negative | 2651977 - 2652666 | 26168.4 |
| nuclear transport factor 2 family protein | DU508_11320 | Not Available | Positive | 2653050 - 2653544 | 18592.7 |
| hypothetical protein | DU508_11325 | Not Available | Positive | 2653583 - 2654596 | 38254.3 |
| deaminase | DU508_11330 | Not Available | Negative | 2654784 - 2655335 | 20718.1 |
| hypothetical protein | DU508_11340 | Not Available | Positive | 2656825 - 2657859 | 37306.3 |
| Trna-ser | Not Available | Not Available | Positive | 2658361 - 2658448 | Not Available |
| doxx family membrane protein | DU508_11350 | Not Available | Negative | 2658612 - 2659046 | 16142.3 |
| catalase/peroxidase hpi | DU508_11355 | Not Available | Positive | 2659270 - 2661555 | 83735.6 |
| hypothetical protein | DU508_11360 | Not Available | Negative | 2662063 - 2663346 | 47684.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

