Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DU508_11260 | Not Available | Negative | 2637719 - 2638123 | 14910.1 |
| response regulator | DU508_11265 | Not Available | Positive | 2638746 - 2641037 | 86244.3 |
| glycosyl transferase | DU508_11270 | Not Available | Negative | 2641063 - 2641794 | 28504.2 |
| hypothetical protein | DU508_11275 | Not Available | Negative | 2641791 - 2643317 | 57682.2 |
| glycosyltransferase family 2 protein | DU508_11280 | Not Available | Positive | 2643424 - 2644179 | 29023.3 |
| glycosyltransferase family 2 protein | DU508_11285 | Not Available | Negative | 2644182 - 2645096 | 34928.6 |
| glycosyltransferase family 1 protein | DU508_11290 | Not Available | Negative | 2645347 - 2646549 | 46247.5 |
| acyltransferase | DU508_11295 | Not Available | Negative | 2646555 - 2647064 | 19741.9 |
| glycosyltransferase family 2 protein | DU508_11300 | Not Available | Negative | 2647161 - 2648363 | 45573.3 |
| o-antigen ligase domain-containing protein | DU508_11305 | Not Available | Negative | 2648347 - 2649804 | 53617.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

