Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_11210 | Not Available | Positive | 2624994 - 2625248 | 8647.14 |
| tlpa family protein disulfide reductase | DU508_11215 | Not Available | Positive | 2625298 - 2626656 | 53386.9 |
| hypothetical protein | DU508_11220 | Not Available | Positive | 2627045 - 2627809 | 28836.0 |
| hypothetical protein | DU508_11225 | Not Available | Positive | 2627947 - 2628231 | 10897.3 |
| arac family transcriptional regulator | DU508_11230 | Not Available | Negative | 2628527 - 2629447 | 35067.1 |
| nad-dependent epimerase/dehydratase family protein | DU508_11235 | Not Available | Negative | 2629460 - 2630353 | 31964.0 |
| transcriptional regulator | DU508_11240 | Not Available | Negative | 2630582 - 2630935 | 13574.6 |
| sdr family nad(p)-dependent oxidoreductase | DU508_11245 | Not Available | Positive | 2631019 - 2631813 | 29119.8 |
| pas domain s-box protein | DU508_11250 | Not Available | Negative | 2631893 - 2636236 | 164153.0 |
| sugar transferase | DU508_11255 | Not Available | Negative | 2636517 - 2637584 | 40948.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

