Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | DU508_11160 | Not Available | Positive | 2609816 - 2611330 | 55783.5 |
| ankyrin repeat domain-containing protein | DU508_11165 | Not Available | Positive | 2611517 - 2612989 | 53115.4 |
| duf2271 domain-containing protein | DU508_11170 | Not Available | Positive | 2612994 - 2613479 | 18068.8 |
| fad-binding oxidoreductase | DU508_11175 | Not Available | Positive | 2613672 - 2615861 | 82357.5 |
| fad:protein fmn transferase | DU508_11180 | Not Available | Negative | 2617109 - 2618026 | 33596.8 |
| tonb-dependent siderophore receptor | DU508_11185 | Not Available | Negative | 2618295 - 2620697 | 86994.4 |
| hypothetical protein | DU508_11190 | Not Available | Negative | 2620848 - 2621951 | 42125.5 |
| dna-binding response regulator | DU508_11195 | Not Available | Negative | 2622192 - 2622908 | 27589.1 |
| hypothetical protein | DU508_11200 | Not Available | Positive | 2623137 - 2623397 | 9839.27 |
| tlpa family protein disulfide reductase | DU508_11205 | Not Available | Positive | 2623679 - 2624854 | 45164.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

