Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_11060 | Not Available | Positive | 2585563 - 2585754 | 6974.3 |
| nudix domain-containing protein | DU508_11065 | Not Available | Positive | 2585830 - 2586285 | 17295.8 |
| dna alkylation repair protein | DU508_11070 | Not Available | Negative | 2586282 - 2587385 | 42177.2 |
| nad(p)-dependent oxidoreductase | DU508_11075 | Not Available | Positive | 2587556 - 2588398 | 29990.4 |
| tetratricopeptide repeat protein | DU508_11080 | Not Available | Negative | 2588399 - 2589808 | 53261.1 |
| blai/meci/copy family transcriptional regulator | DU508_11085 | Not Available | Positive | 2590575 - 2590970 | 15296.5 |
| hypothetical protein | DU508_11090 | Not Available | Positive | 2591084 - 2593006 | 71659.9 |
| tonb-dependent receptor | DU508_11095 | Not Available | Positive | 2593030 - 2595477 | 92134.1 |
| gluconate permease | DU508_11100 | Not Available | Negative | 2595561 - 2596850 | 45167.8 |
| hypothetical protein | DU508_11105 | Not Available | Negative | 2596878 - 2597060 | 6872.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

