Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_11010 | Not Available | Positive | 2572718 - 2573614 | 31096.9 |
| hypothetical protein | DU508_11015 | Not Available | Positive | 2573626 - 2574477 | 30201.4 |
| hypothetical protein | DU508_11020 | Not Available | Positive | 2574467 - 2575399 | 32953.8 |
| gliding motility-associated c-terminal domain-containing protein | DU508_11025 | Not Available | Positive | 2575744 - 2577036 | 46669.3 |
| type ix secretion system membrane protein porp/sprf | DU508_11030 | Not Available | Positive | 2577240 - 2578208 | 35956.8 |
| flagellar motor protein motb | DU508_11035 | Not Available | Positive | 2578245 - 2580215 | 74119.0 |
| sdr family nad(p)-dependent oxidoreductase | DU508_11040 | Not Available | Negative | 2580757 - 2581557 | 28901.7 |
| fad-dependent oxidoreductase | DU508_11045 | Not Available | Negative | 2581603 - 2583150 | 56924.1 |
| hypothetical protein | DU508_11050 | Not Available | Negative | 2583727 - 2584014 | 10831.6 |
| glutathione-dependent formaldehyde dehydrogenase | DU508_11055 | Not Available | Positive | 2584191 - 2585348 | 41899.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

