Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pig-l family deacetylase | DU508_10945 | Not Available | Positive | 2547085 - 2549553 | 91944.6 |
| hypothetical protein | DU508_10950 | Not Available | Positive | 2549630 - 2549851 | 8291.2 |
| putative toxin-antitoxin system toxin component, pin family | DU508_10955 | Not Available | Positive | 2549832 - 2550161 | 13083.8 |
| sodium:solute symporter | DU508_10960 | Not Available | Positive | 2550385 - 2552076 | 62736.1 |
| duf2911 domain-containing protein | DU508_10965 | Not Available | Positive | 2552108 - 2552626 | 18817.7 |
| alpha-mannosidase | DU508_10970 | Not Available | Positive | 2554104 - 2556188 | 78975.5 |
| hypothetical protein | DU508_10975 | Not Available | Positive | 2556281 - 2556472 | 6992.34 |
| response regulator | DU508_10980 | Not Available | Negative | 2557254 - 2557661 | 15371.9 |
| giy-yig nuclease family protein | DU508_11000 | Not Available | Positive | 2567756 - 2568049 | 11517.9 |
| hypothetical protein | DU508_11005 | Not Available | Positive | 2568512 - 2572678 | 144036.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

