Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | DU508_10895 | Not Available | Negative | 2537888 - 2538253 | 13704.8 |
| type ii toxin-antitoxin system higb family toxin | DU508_10900 | Not Available | Negative | 2538325 - 2538627 | 11838.1 |
| ydcf family protein | DU508_10905 | Not Available | Negative | 2538802 - 2539554 | 28268.0 |
| ytxh domain-containing protein | DU508_10910 | Not Available | Negative | 2539607 - 2539972 | 13425.2 |
| osmc family peroxiredoxin | DU508_10915 | Not Available | Positive | 2540087 - 2540467 | 13899.9 |
| duf2130 domain-containing protein | DU508_10920 | Not Available | Positive | 2540552 - 2541805 | 48668.4 |
| glycoside hydrolase family 97 protein | DU508_10925 | Not Available | Positive | 2542071 - 2544203 | 80333.3 |
| acyl-coa thioesterase | DU508_10930 | Not Available | Positive | 2545345 - 2545821 | 17828.9 |
| hypothetical protein | DU508_10935 | Not Available | Positive | 2546179 - 2546421 | 8892.82 |
| hypothetical protein | DU508_10940 | Not Available | Positive | 2546498 - 2546740 | 8862.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

