Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxy-acid dehydratase | DU508_10845 | Not Available | Negative | 2528443 - 2530125 | 59523.7 |
| branched-chain-amino-acid transaminase | DU508_10850 | Not Available | Negative | 2530225 - 2531115 | 33265.0 |
| hypothetical protein | DU508_10855 | Not Available | Negative | 2531294 - 2531482 | 6804.6 |
| atp synthase f1 subunit epsilon | DU508_10860 | Not Available | Negative | 2532124 - 2532369 | 8717.63 |
| f0f1 atp synthase subunit beta | DU508_10865 | Not Available | Negative | 2532457 - 2533959 | 54193.0 |
| sdr family nad(p)-dependent oxidoreductase | DU508_10870 | Not Available | Positive | 2534121 - 2535029 | 33614.2 |
| peroxiredoxin | DU508_10875 | Not Available | Positive | 2535213 - 2535677 | 17266.4 |
| Trna-arg | Not Available | Not Available | Positive | 2535776 - 2535849 | Not Available |
| adenylate kinase | DU508_10885 | Not Available | Positive | 2536213 - 2536782 | 21125.4 |
| gtpase obge | DU508_10890 | Not Available | Positive | 2536857 - 2537852 | 35744.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

