Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_10745 | Not Available | Positive | 2507067 - 2507804 | 27468.1 |
| port family protein | DU508_10750 | Not Available | Positive | 2507899 - 2508708 | 30222.3 |
| abc transporter atp-binding protein | DU508_10755 | Not Available | Positive | 2508894 - 2509886 | 37069.9 |
| atp-binding protein | DU508_10760 | Not Available | Positive | 2509979 - 2511187 | 47426.1 |
| hypothetical protein | DU508_10765 | Not Available | Negative | 2511247 - 2511651 | 15167.2 |
| duf4230 domain-containing protein | DU508_10770 | Not Available | Positive | 2511787 - 2512347 | 21168.8 |
| cupin domain-containing protein | DU508_10775 | Not Available | Negative | 2512657 - 2513004 | 12906.6 |
| threonine dehydratase | DU508_10780 | Not Available | Negative | 2513149 - 2514399 | 45925.6 |
| 2-isopropylmalate synthase | DU508_10785 | Not Available | Negative | 2514718 - 2515878 | 42637.0 |
| 3-isopropylmalate dehydrogenase | DU508_10790 | Not Available | Negative | 2515890 - 2516981 | 40233.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

