Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-1-semialdehyde-2,1-aminomutase | DU508_10695 | Not Available | Positive | 2497252 - 2498571 | 47957.5 |
| two-component sensor histidine kinase | DU508_10700 | Not Available | Positive | 2498928 - 2499794 | 32773.2 |
| dna-binding response regulator | DU508_10705 | Not Available | Positive | 2499803 - 2500507 | 27282.1 |
| hypothetical protein | DU508_10710 | Not Available | Positive | 2500507 - 2501022 | 19750.0 |
| uroporphyrinogen decarboxylase | DU508_10715 | Not Available | Positive | 2501243 - 2502268 | 38113.4 |
| hypothetical protein | DU508_10720 | Not Available | Positive | 2502354 - 2502587 | 8691.58 |
| hypothetical protein | DU508_10725 | Not Available | Positive | 2502590 - 2503333 | 28902.5 |
| protoporphyrinogen ix oxidase | DU508_10730 | Not Available | Positive | 2503330 - 2503884 | 21535.6 |
| hypothetical protein | DU508_10735 | Not Available | Positive | 2504050 - 2505207 | 44979.6 |
| rna polymerase sigma factor | DU508_10740 | Not Available | Positive | 2506517 - 2507086 | 21730.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

