Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rdd family protein | DU508_10645 | Not Available | Positive | 2485412 - 2486020 | 22970.2 |
| aaa family atpase | DU508_10650 | Not Available | Negative | 2486046 - 2487242 | 45823.4 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | DU508_10655 | Not Available | Positive | 2487399 - 2489420 | 75321.8 |
| mechanosensitive ion channel family protein | DU508_10660 | Not Available | Positive | 2489561 - 2490469 | 34664.9 |
| hypothetical protein | DU508_10665 | Not Available | Positive | 2490547 - 2490834 | 10820.8 |
| alpha/beta hydrolase | DU508_10670 | Not Available | Negative | 2491051 - 2491878 | 30696.4 |
| doxx family membrane protein | DU508_10675 | Not Available | Negative | 2491984 - 2492379 | 15387.5 |
| glutamyl-trna reductase | DU508_10680 | Not Available | Positive | 2492484 - 2493710 | 46740.6 |
| hydroxymethylbilane synthase | DU508_10685 | Not Available | Positive | 2494241 - 2495824 | 58595.2 |
| porphobilinogen synthase | DU508_10690 | Not Available | Positive | 2496070 - 2497038 | 35981.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

