Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mmcq/yjbr family dna-binding protein | DU508_00980 | Not Available | Negative | 240832 - 241176 | 12878.2 |
| dna polymerase iii subunit epsilon | DU508_00985 | Not Available | Negative | 241320 - 242693 | 51867.4 |
| autotransporter outer membrane beta-barrel domain-containing protein | DU508_00990 | Not Available | Negative | 242857 - 243486 | 22402.3 |
| response regulator | DU508_00995 | Not Available | Negative | 243497 - 243859 | 13745.6 |
| dna-binding response regulator | DU508_01000 | Not Available | Negative | 243978 - 244718 | 27795.7 |
| hypothetical protein | DU508_01005 | Not Available | Negative | 244871 - 245965 | 42818.4 |
| dna-binding response regulator | DU508_01010 | Not Available | Negative | 246084 - 246824 | 28218.0 |
| hypothetical protein | DU508_01015 | Not Available | Negative | 246853 - 247104 | 10526.0 |
| is982 family transposase | DU508_01020 | Not Available | Positive | 247493 - 248323 | 31747.8 |
| merr family transcriptional regulator | DU508_01025 | Not Available | Positive | 249533 - 250420 | 34292.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

