Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-diphosphate phosphatase | DU508_10490 | Not Available | Negative | 2447982 - 2448776 | 29082.7 |
| type ii toxin-antitoxin system vapc family toxin | DU508_10495 | Not Available | Negative | 2448792 - 2449178 | 14832.2 |
| duf2281 domain-containing protein | DU508_10500 | Not Available | Negative | 2449178 - 2449381 | 7847.51 |
| duf3098 domain-containing protein | DU508_10505 | Not Available | Negative | 2449420 - 2449647 | 8371.71 |
| cell division protein ftsx | DU508_10510 | Not Available | Negative | 2449647 - 2450525 | 32785.8 |
| hypothetical protein | DU508_10515 | Not Available | Positive | 2450761 - 2451135 | 13904.5 |
| leucine--trna ligase | DU508_10520 | Not Available | Positive | 2451300 - 2454128 | 108530.0 |
| atp-dependent helicase | DU508_10525 | Not Available | Negative | 2454341 - 2455636 | 47847.3 |
| hypothetical protein | DU508_10530 | Not Available | Negative | 2455885 - 2456505 | 23713.7 |
| apc family permease | DU508_10535 | Not Available | Negative | 2456635 - 2457975 | 48769.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

