Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU508_10435 | Not Available | Negative | 2434714 - 2434908 | 7255.57 |
| rna polymerase subunit sigma-24 | DU508_10440 | Not Available | Negative | 2434997 - 2435581 | 22933.8 |
| excinuclease abc subunit uvra | DU508_10445 | Not Available | Positive | 2435843 - 2438656 | 104127.0 |
| lysine transporter lyse | DU508_10450 | Not Available | Positive | 2438665 - 2439318 | 24609.9 |
| duf2157 domain-containing protein | DU508_10460 | Not Available | Negative | 2441408 - 2442445 | 39787.6 |
| sodium:proton antiporter | DU508_10465 | Not Available | Negative | 2442618 - 2444831 | 81177.7 |
| hypothetical protein | DU508_10470 | Not Available | Negative | 2444924 - 2445274 | 13894.9 |
| bifunctional riboflavin kinase/fad synthetase | DU508_10475 | Not Available | Negative | 2445328 - 2446356 | 38519.4 |
| yitt family protein | DU508_10480 | Not Available | Negative | 2446369 - 2447229 | 31153.6 |
| trna pseudouridine(55) synthase trub | DU508_10485 | Not Available | Negative | 2447226 - 2447954 | 27360.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

