Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 2421374 - 2421450 | Not Available |
| hypothetical protein | DU508_10390 | Not Available | Positive | 2421586 - 2421966 | 14877.5 |
| yjgp/yjgq family permease | DU508_10395 | Not Available | Positive | 2421996 - 2423420 | 53247.9 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | DU508_10400 | Not Available | Positive | 2423561 - 2424772 | 44249.4 |
| translocation/assembly module tamb | DU508_10405 | Not Available | Negative | 2425011 - 2429447 | 165174.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | DU508_10410 | Not Available | Positive | 2429523 - 2430524 | 36311.6 |
| hypothetical protein | DU508_10415 | Not Available | Positive | 2430810 - 2431007 | 7099.06 |
| recombinase reca | DU508_10420 | Not Available | Negative | 2431086 - 2432099 | 36228.8 |
| endonuclease iii | DU508_10425 | Not Available | Negative | 2432234 - 2432899 | 25297.7 |
| mfs transporter | DU508_10430 | Not Available | Negative | 2433344 - 2434531 | 41822.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

