Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone dnak | DU508_10280 | Not Available | Positive | 2399588 - 2401492 | 68056.4 |
| aminoglycoside phosphotransferase family protein | DU508_10285 | Not Available | Negative | 2401849 - 2402925 | 41407.9 |
| nucleotidyltransferase | DU508_10290 | Not Available | Negative | 2402916 - 2403815 | 34074.6 |
| duf853 family protein | DU508_10295 | Not Available | Negative | 2403943 - 2405514 | 56887.8 |
| merr family transcriptional regulator | DU508_10300 | Not Available | Negative | 2405620 - 2405916 | 11491.8 |
| j domain-containing protein | DU508_10305 | Not Available | Negative | 2405922 - 2406821 | 33908.8 |
| s9 family peptidase | DU508_10310 | Not Available | Negative | 2407016 - 2409433 | 89576.5 |
| duf1801 domain-containing protein | DU508_10315 | Not Available | Negative | 2409608 - 2410024 | 15470.7 |
| hypothetical protein | DU508_10320 | Not Available | Positive | 2410345 - 2410749 | 15655.6 |
| pas domain s-box protein | DU508_10325 | Not Available | Positive | 2411322 - 2413817 | 94086.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

