Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s13 | DU508_10230 | Not Available | Positive | 2387691 - 2388068 | 14214.4 |
| 30s ribosomal protein s11 | DU508_10235 | Not Available | Positive | 2388091 - 2388480 | 13786.8 |
| 30s ribosomal protein s4 | DU508_10240 | Not Available | Positive | 2388542 - 2389150 | 22902.6 |
| dna-directed rna polymerase subunit alpha | DU508_10245 | Not Available | Positive | 2389236 - 2390228 | 37122.9 |
| 50s ribosomal protein l17 | DU508_10250 | Not Available | Positive | 2390355 - 2390891 | 19824.8 |
| hypothetical protein | DU508_10255 | Not Available | Positive | 2391251 - 2394166 | 110024.0 |
| gluconate 2-dehydrogenase subunit 3 family protein | DU508_10260 | Not Available | Negative | 2394229 - 2394861 | 23503.2 |
| gmc family oxidoreductase | DU508_10265 | Not Available | Negative | 2394872 - 2396608 | 63970.6 |
| sam-dependent methyltransferase | DU508_10270 | Not Available | Positive | 2396877 - 2398082 | 45471.0 |
| duf1304 domain-containing protein | DU508_10275 | Not Available | Negative | 2398550 - 2398909 | 13262.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

