Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s8 | DU508_10180 | Not Available | Positive | 2382466 - 2382864 | 14599.0 |
| 50s ribosomal protein l6 | DU508_10185 | Not Available | Positive | 2382884 - 2383441 | 20062.4 |
| 50s ribosomal protein l18 | DU508_10190 | Not Available | Positive | 2383447 - 2383800 | 12658.3 |
| 30s ribosomal protein s5 | DU508_10195 | Not Available | Positive | 2383818 - 2384336 | 17967.0 |
| 50s ribosomal protein l30 | DU508_10200 | Not Available | Positive | 2384341 - 2384520 | 6600.3 |
| 50s ribosomal protein l15 | DU508_10205 | Not Available | Positive | 2384624 - 2385070 | 15440.7 |
| preprotein translocase subunit secy | DU508_10210 | Not Available | Positive | 2385078 - 2386418 | 48136.4 |
| type i methionyl aminopeptidase | DU508_10215 | Not Available | Positive | 2386428 - 2387213 | 28455.3 |
| translation initiation factor if-1 | DU508_10220 | Not Available | Positive | 2387285 - 2387503 | 8322.27 |
| 50s ribosomal protein l36 | DU508_10225 | Not Available | Positive | 2387505 - 2387621 | 4548.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

