Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s10 | DU508_10030 | Not Available | Positive | 2363208 - 2363513 | 11418.2 |
| hypothetical protein | DU508_10035 | Not Available | Positive | 2363530 - 2363856 | 12425.3 |
| dna-binding response regulator | DU508_10040 | Not Available | Negative | 2363860 - 2364519 | 24321.9 |
| hypothetical protein | DU508_10045 | Not Available | Positive | 2364884 - 2365162 | 10346.5 |
| ytxh domain-containing protein | DU508_10050 | Not Available | Negative | 2365438 - 2365632 | 7372.93 |
| hypothetical protein | DU508_10055 | Not Available | Negative | 2365644 - 2366117 | 17503.8 |
| deoxyguanosinetriphosphate triphosphohydrolase | DU508_10060 | Not Available | Positive | 2366235 - 2367578 | 51157.9 |
| hypothetical protein | DU508_10065 | Not Available | Positive | 2367868 - 2370006 | 71801.0 |
| gliding motility-associated c-terminal domain-containing protein | DU508_10070 | Not Available | Positive | 2370048 - 2370599 | 20863.2 |
| type ix secretion system membrane protein porp/sprf | DU508_10075 | Not Available | Positive | 2370613 - 2371494 | 33022.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

