Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lmo0937 family membrane protein | DU508_00930 | Not Available | Positive | 231843 - 232001 | 5497.28 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DU508_00935 | Not Available | Negative | 232161 - 232826 | 25150.2 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | DU508_00940 | Not Available | Negative | 232906 - 233955 | 39849.0 |
| abc transporter permease | DU508_00945 | Not Available | Positive | 234156 - 235400 | 46292.2 |
| pyridoxal phosphate-dependent aminotransferase | DU508_00950 | Not Available | Negative | 235708 - 236850 | 42048.1 |
| cation transporter | DU508_00955 | Not Available | Positive | 237018 - 238004 | 36906.2 |
| nudix domain-containing protein | DU508_00960 | Not Available | Positive | 237991 - 238437 | 17153.3 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | DU508_00965 | Not Available | Positive | 238448 - 239752 | 48485.5 |
| srpbcc domain-containing protein | DU508_00970 | Not Available | Negative | 239861 - 240295 | 16781.6 |
| extradiol dioxygenase | DU508_00975 | Not Available | Negative | 240320 - 240736 | 15393.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

