Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactonase family protein | DU508_09875 | Not Available | Negative | 2325388 - 2326497 | 40091.4 |
| pseudouridine synthase | DU508_09880 | Not Available | Negative | 2326740 - 2328212 | 56235.8 |
| lytic transglycosylase domain-containing protein | DU508_09885 | Not Available | Positive | 2328477 - 2329259 | 29571.0 |
| phenylacetic acid degradation protein | DU508_09890 | Not Available | Positive | 2329499 - 2330548 | 40343.4 |
| hypothetical protein | DU508_09900 | Not Available | Positive | 2331831 - 2332793 | 36985.7 |
| excinuclease abc subunit uvra | DU508_09905 | Not Available | Positive | 2332905 - 2335811 | 108432.0 |
| tatd family deoxyribonuclease | DU508_09910 | Not Available | Positive | 2335898 - 2336665 | 28997.8 |
| type i asparaginase | DU508_09915 | Not Available | Positive | 2337642 - 2338661 | 37713.6 |
| mbl fold metallo-hydrolase | DU508_09920 | Not Available | Positive | 2339022 - 2340434 | 51239.7 |
| ypda family putative bacillithiol disulfide reductase | DU508_09925 | Not Available | Positive | 2340488 - 2341453 | 36029.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

