Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded-dna-specific exonuclease recj | DU508_09670 | Not Available | Positive | 2281467 - 2283167 | 63599.5 |
| lps export abc transporter atp-binding protein | DU508_09675 | Not Available | Positive | 2283253 - 2283993 | 27720.8 |
| hypothetical protein | DU508_09680 | Not Available | Positive | 2284003 - 2285526 | 58589.7 |
| duf1232 domain-containing protein | DU508_09685 | Not Available | Positive | 2285561 - 2285995 | 16188.9 |
| duf2752 domain-containing protein | DU508_09690 | Not Available | Positive | 2285976 - 2286299 | 12120.3 |
| hypothetical protein | DU508_09695 | Not Available | Positive | 2286449 - 2286769 | 11382.2 |
| brxa/brxb family bacilliredoxin | DU508_09700 | Not Available | Positive | 2286870 - 2287280 | 14962.1 |
| tigr00159 family protein | DU508_09705 | Not Available | Negative | 2287366 - 2288157 | 29897.0 |
| four helix bundle protein | DU508_09710 | Not Available | Negative | 2288337 - 2288699 | 13859.8 |
| dihydropteroate synthase | DU508_09715 | Not Available | Negative | 2288919 - 2289773 | 31462.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

