Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2132 domain-containing protein | DU508_09620 | Not Available | Positive | 2269223 - 2269444 | 8589.38 |
| gtra family protein | DU508_09625 | Not Available | Negative | 2269730 - 2270110 | 14684.2 |
| glycosyl transferase | DU508_09630 | Not Available | Negative | 2270113 - 2271753 | 62899.7 |
| pyridoxine 5'-phosphate synthase | DU508_09635 | Not Available | Positive | 2271906 - 2272622 | 26517.6 |
| eama family transporter | DU508_09640 | Not Available | Positive | 2272728 - 2273621 | 32656.8 |
| hypothetical protein | DU508_09645 | Not Available | Positive | 2273906 - 2274469 | 21118.6 |
| glycine dehydrogenase (aminomethyl-transferring) | DU508_09650 | Not Available | Positive | 2275020 - 2277896 | 105082.0 |
| ycei family protein | DU508_09655 | Not Available | Positive | 2278429 - 2279016 | 20564.9 |
| mbl fold metallo-hydrolase | DU508_09660 | Not Available | Negative | 2279147 - 2279917 | 29102.2 |
| sulfatase | DU508_09665 | Not Available | Positive | 2280041 - 2281366 | 49638.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

