Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | DU508_00880 | Not Available | Positive | 218322 - 219674 | 50355.5 |
| hth domain-containing protein | DU508_00885 | Not Available | Positive | 219958 - 220545 | 23172.2 |
| fecr family protein | DU508_00890 | Not Available | Positive | 220716 - 221867 | 42917.2 |
| susc/raga family tonb-linked outer membrane protein | DU508_00895 | Not Available | Positive | 222083 - 225433 | 125554.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DU508_00900 | Not Available | Positive | 225465 - 227027 | 58368.3 |
| mbl fold metallo-hydrolase | DU508_00905 | Not Available | Positive | 227157 - 228257 | 41485.5 |
| hypothetical protein | DU508_00910 | Not Available | Positive | 228304 - 228666 | 13638.0 |
| hypothetical protein | DU508_00915 | Not Available | Positive | 228717 - 229508 | 30575.7 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DU508_00920 | Not Available | Positive | 229510 - 230433 | 35604.4 |
| hypothetical protein | DU508_00925 | Not Available | Positive | 230551 - 231051 | 17013.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

