Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | DU508_09465 | Not Available | Positive | 2229352 - 2230332 | 35486.7 |
| peptidylprolyl isomerase | DU508_09470 | Not Available | Positive | 2230414 - 2231388 | 35127.4 |
| cyth domain-containing protein | DU508_09475 | Not Available | Negative | 2231551 - 2232021 | 18131.2 |
| beta-n-acetylhexosaminidase | DU508_09480 | Not Available | Negative | 2232021 - 2233964 | 73537.5 |
| aldehyde dehydrogenase family protein | DU508_09485 | Not Available | Negative | 2234228 - 2235592 | 50132.0 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | DU508_09490 | Not Available | Negative | 2235677 - 2236384 | 27198.2 |
| iron-containing alcohol dehydrogenase | DU508_09495 | Not Available | Negative | 2236450 - 2237598 | 42033.7 |
| glutamine synthetase | DU508_09500 | Not Available | Negative | 2238077 - 2239438 | 50858.8 |
| ethanolamine permease | DU508_09505 | Not Available | Negative | 2239438 - 2240751 | 46977.8 |
| hypothetical protein | DU508_09510 | Not Available | Negative | 2241181 - 2241402 | 8972.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

