Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose-phosphate pyrophosphokinase | DU508_09415 | Not Available | Positive | 2220175 - 2221116 | 34072.2 |
| 50s ribosomal protein l25/general stress protein ctc | DU508_09420 | Not Available | Positive | 2221707 - 2222291 | 21554.4 |
| aminoacyl-trna hydrolase | DU508_09425 | Not Available | Positive | 2223662 - 2224222 | 20625.2 |
| hypothetical protein | DU508_09430 | Not Available | Negative | 2224365 - 2225030 | 24360.0 |
| dna replication/repair protein recf | DU508_09435 | Not Available | Positive | 2225155 - 2226258 | 42623.4 |
| duf721 domain-containing protein | DU508_09440 | Not Available | Positive | 2226251 - 2226541 | 11216.0 |
| hypothetical protein | DU508_09445 | Not Available | Negative | 2226631 - 2226813 | 6422.35 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DU508_09450 | Not Available | Negative | 2226865 - 2227635 | 27209.7 |
| nucleoside-diphosphate kinase | DU508_09455 | Not Available | Negative | 2227769 - 2228188 | 15254.9 |
| bifunctional oligoribonuclease/pap phosphatase nrna | DU508_09460 | Not Available | Positive | 2228305 - 2229315 | 37437.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

