Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | DU508_09365 | Not Available | Positive | 2201483 - 2203063 | 58027.3 |
| hypothetical protein | DU508_09370 | Not Available | Positive | 2203437 - 2203628 | 7220.21 |
| tonb-dependent receptor | DU508_09375 | Not Available | Positive | 2203810 - 2206995 | 116876.0 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_09380 | Not Available | Positive | 2207028 - 2208788 | 66521.8 |
| duf3823 domain-containing protein | DU508_09385 | Not Available | Positive | 2208800 - 2209492 | 24730.1 |
| carboxypeptidase | DU508_09390 | Not Available | Positive | 2209917 - 2211479 | 58548.8 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | DU508_09395 | Not Available | Positive | 2211664 - 2212626 | 35872.4 |
| duf2723 domain-containing protein | DU508_09400 | Not Available | Negative | 2213511 - 2216552 | 114015.0 |
| duf2723 domain-containing protein | DU508_09405 | Not Available | Negative | 2216780 - 2219806 | 114934.0 |
| Trna-gln | Not Available | Not Available | Positive | 2220031 - 2220104 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

