Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | DU508_09315 | Not Available | Positive | 2182167 - 2184128 | 74701.5 |
| beta-phosphoglucomutase | DU508_09320 | Not Available | Positive | 2184251 - 2184937 | 24989.1 |
| glycoside hydrolase family 65 protein | DU508_09325 | Not Available | Positive | 2185064 - 2187382 | 88739.4 |
| alpha-amylase | DU508_09330 | Not Available | Positive | 2187379 - 2189223 | 69328.6 |
| mfs transporter | DU508_09335 | Not Available | Positive | 2189345 - 2190721 | 50845.9 |
| alpha-amylase | DU508_09340 | Not Available | Positive | 2190777 - 2192663 | 70650.9 |
| rna polymerase | DU508_09345 | Not Available | Positive | 2192790 - 2193344 | 21811.2 |
| glycosyl hydrolase | DU508_09350 | Not Available | Negative | 2193917 - 2196541 | 96624.8 |
| fecr family protein | DU508_09355 | Not Available | Positive | 2196938 - 2197999 | 40290.4 |
| susc/raga family tonb-linked outer membrane protein | DU508_09360 | Not Available | Positive | 2198122 - 2201463 | 120502.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

