Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DU508_09265 | Not Available | Positive | 2164585 - 2165934 | 48866.7 |
| duf5107 domain-containing protein | DU508_09270 | Not Available | Positive | 2166022 - 2169324 | 126166.0 |
| duf4965 domain-containing protein | DU508_09275 | Not Available | Positive | 2169835 - 2172306 | 92501.5 |
| dna polymerase iv | DU508_09280 | Not Available | Negative | 2172585 - 2173685 | 40959.4 |
| hypothetical protein | DU508_09285 | Not Available | Positive | 2173795 - 2174145 | 13690.4 |
| dna-binding response regulator | DU508_09290 | Not Available | Negative | 2174167 - 2174526 | 13356.0 |
| laci family transcriptional regulator | DU508_09295 | Not Available | Positive | 2174875 - 2175900 | 38781.2 |
| tonb-dependent receptor | DU508_09300 | Not Available | Positive | 2176323 - 2179298 | 107530.0 |
| ragb/susd family nutrient uptake outer membrane protein | DU508_09305 | Not Available | Positive | 2179395 - 2180978 | 57473.6 |
| susf/suse family outer membrane protein | DU508_09310 | Not Available | Positive | 2180997 - 2182001 | 35476.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

