Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4959 domain-containing protein | DU508_09215 | Not Available | Positive | 2148897 - 2150123 | 45526.0 |
| hypothetical protein | DU508_09220 | Not Available | Positive | 2150152 - 2151363 | 45588.5 |
| glycoside hydrolase family 95 protein | DU508_09225 | Not Available | Positive | 2151448 - 2153778 | 86497.6 |
| galactose mutarotase | DU508_09230 | Not Available | Positive | 2153819 - 2154850 | 38228.1 |
| glycoside hydrolase family 97 protein | DU508_09235 | Not Available | Positive | 2154733 - 2156769 | 76257.4 |
| alpha-galactosidase | DU508_09240 | Not Available | Positive | 2156791 - 2158986 | 83201.9 |
| nucleotidyltransferase | DU508_09245 | Not Available | Positive | 2159128 - 2159430 | 11795.1 |
| duf86 domain-containing protein | DU508_09250 | Not Available | Positive | 2159420 - 2159758 | 13008.6 |
| glycoside hydrolase family 92 protein | DU508_09255 | Not Available | Positive | 2159816 - 2162131 | 86297.8 |
| 9-o-acetylesterase | DU508_09260 | Not Available | Positive | 2162319 - 2164310 | 73299.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

