Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b5 | DU508_09115 | Not Available | Positive | 2121957 - 2122190 | 8970.63 |
| sugar kinase | DU508_09120 | Not Available | Negative | 2122266 - 2123186 | 33879.8 |
| Trna-asn | Not Available | Not Available | Positive | 2123332 - 2123408 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 2123492 - 2123565 | Not Available |
| recombinase | DU508_09135 | Not Available | Positive | 2123805 - 2125088 | 50016.3 |
| recombinase | DU508_09140 | Not Available | Positive | 2125189 - 2126484 | 50809.5 |
| sir2 family protein | DU508_09145 | Not Available | Positive | 2126887 - 2128767 | 72483.6 |
| gnat family n-acetyltransferase | DU508_09150 | Not Available | Positive | 2129047 - 2129610 | 20681.7 |
| duf1493 family protein | DU508_09155 | Not Available | Negative | 2129907 - 2130386 | 18653.3 |
| ferritin-like domain-containing protein | DU508_09160 | Not Available | Positive | 2130819 - 2131373 | 20041.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

